The cox regression model applied to risk factor analysis of infections in the breeding and multiplying herds in the Danish SPF system

The Cox regression model is discussed with emphasis on model examination and selection. The model is applied in a multivariate risk factor analysis of Mycoplasma hyopneumoniae (MH) infections in the breeding and multiplying herds in the Danish specific pathogen-free (SPF) pig production system. The analysis showed that the pattern of infections was in agreement with the theory that both airborne transmission and spread through trade in subclinically infected animals are major causes of MH infections.     

East coast fever as a cause of calf mortality in zanzibar

Crossbred and zebu calves at 4 to 5 months of age in an area where tick control was carried out showed little difference in mortality. Crossbred calves at 10 months of age had a mortality rate of 20% from all causes, 14% from East Coast fever. Serological results plus mortality studies showed that the survival rate of crossbred calves known to have been exposed to ECF was 57%. Serological results further showed that, in spite of tick exposure, only 26% of the crossbreds had seroconverted at 10.3 months of age while 15% zebus had positive titres.     

Influence of high risk exposure to trypanosoma infection on the reproduction of the Baoulé cattle in Burkina Faso

Trypanosome infection influences reproductive function in trypanotolerant as well as trypanosensitive cattle. Abortions and anoestrus behaviour have been noted in short horned Baoulé cattle in high risk areas of trypanosome infestation. These reproductive disturbances, which are systematically encountered in sensitive animals as well as some resistant animals, seem to be linked with a degradation in the physical state of the animal, anemia, and hyperthermia. Finally, a considerable amount of individual variation has been reported in what concerns the animals response to trypanosome infection.     

Infrared thermography and ultrasonography to indirectly monitor the influence of liner type and overmilking on teat tissue recovery

Eight Danish Holstein cows were milked with a 1-mm thick specially designed soft liner on their right rear teat and a standard liner mounted under extra high tension on their left rear teat. Four of the animals were overmilked for 5 min. Rear teats were subjected to ultrasound examination on the first day and to infrared thermography on the second day. Teats were submersed in ethanol 20 min post-milking on the second day. Ultrasonography measurements showed that teat canal length increased by 30-41% during milking. Twenty minutes after milking, teats milked with modified standard liners still had elongated teat canals while teats milked with the soft liner were normalized. Overmilking tended to increase teat wall thickness. Approximately 80% of variability in teat canal length, from before teat preparation to after milking, could be explained by changes during teat preparation. Thermography indicated a general drop in teat temperature during teat preparation. Teat temperature increased during milking and continued to increase until the ethanol challenge induced a significant drop. Temperatures approached pre-challenge rather than pre-milking temperatures within 10 minutes after challenge. Teat temperatures were dependent on type of liner. Mid-teat temperatures post-challenge relative to pre-teat preparation were dependent on overmilking. Thermography and ultrasound were considered useful methods to indirectly and non invasively evaluate teat tissue integrity.     

Prevalence and incidence of bovine trypanosomosis on the Adamaoua plateau in Cameroon 10 years after the tsetse eradication campaign

Between March 2004 and February 2005, the monthly incidence of trypanosome infections was measured in cattle from nine sentinel herds in the Adamaoua province of Cameroon. Three herds of 20 cattle each were kept on the plateau which has been cleared from tsetse flies about 10 years ago, three other herds were grazing in the tsetse infested valley whereas the last three were herded in the buffer zone. The cross-sectional study showed that the initial trypanosomosis prevalence was 1.8, 5.2 and 2.0% on the plateau, in the buffer zone and the valley, respectively. During the longitudinal study, the trypanosomosis incidence was high in the valley (3.7-20%) and the buffer zone (1.8-13.4%), whereas it was significantly lower (0-2.1%) on the plateau. Tsetse flies, mainly Glossina morsitans submorsitans and a few G. tachinoides, were caught in the valley and the buffer zone, but none on the plateau. The data indicate a low trypanosomosis risk on the plateau. Further entomological studies, however, are required to clarify the origin of the trypanosome infections on the plateau.     

Determination of the sequence of the complete open reading frame and the 5'NTR of the Paderborn isolate of classical swine fever virus

The classical swine fever (CSF) epidemic in the Netherlands in 1997-1998 lasted 14 months, during which 429 infected and 1300 at risk herds were culled, at an estimated economical cost of 2 billion US dollars. Despite the overwhelming scale of the epizootic, the CSF virus (CSFV) strain causing the outbreak has remained largely uncharacterized. The Dutch epizootic is epidemiologically linked to a small CSF outbreak in 1997, in Paderborn in Germany. E2 and partial 5' NTR sequencing has shown that the index Paderborn isolate, and several Dutch isolates taken during the 1997-1998 epizootic, are virtually identical, confirming that the Paderborn isolate triggered the Dutch outbreak, and furthermore showing that this single isolate was stable throughout the whole Dutch outbreak (the above reviewed in [C. Terpstra, A. J. de Smit, Veterinary Microbiol. 77 (2000) 3-15]). We determined the nucleotide sequence of the 5' NTR (by 5' RACE) and the complete open reading frame of the Paderborn isolate (GenBank AY072924). Our sequence was identical to previously published partial 5'NTR and E2 sequences for the index Paderborn 1997 and Dutch 1997 (Venhorst) isolates, confirming the identity of the virus we sequenced. Phylogenetic analysis based on the complete open reading frame showed that Paderborn is genetically very different from common European laboratory reference strains. Neutralization studies showed that Paderborn is also antigenically very different from common laboratory strains such as Alfort 187. Paderborn is the only recent European CSFV field isolate for which a complete sequence is available, and given Paderborns genetic and antigenic uniqueness, the Paderborn sequence may have practical use for diagnostic and vaccine antigen development.     

Little salt spring, Florida: a unique underwater site

Little Salt Spring in southwest Florida, consisting of a shallow, water-filled basin above a deep, vertical underwater cavern, was a freshwater cenote in the peninsula's drier past. It collected and preserved perishable organic artifacts and other evidence of Paleo-Indian and Archaic Indian origin ranging in age from 12,000 to 9000 and from 6800 to 5200 years ago. An Archaic Period cemetery containing an estimated 1000 burials occupies an adjoining muck-filled slough and presently drowned portions of the basin of the spring. Artifacts and the nature of interment suggest a cultural link between the Archaic people and the much later Glades Tradition of southern Florida.     

Productivity and recovery of forage fish under climate change and fishing: North Sea sandeel as a case study

Forage fish occupy a central position in marine food‐webs worldwide by mediating the transfer of energy and organic matter from lower to higher trophic levels. The lesser sandeel (Ammodytes marinus) is one of the ecologically and economically most important forage fish species in the North‐east Atlantic, acting as a key prey for predatory fish and sea birds, as well as supporting a large commercial fishery. In this case study, we investigate the underlying factors affecting recruitment and how these in turn affect productivity of the North Sea sandeel using long‐term data and modelling. Our results demonstrate how sandeel productivity in the central North Sea (Dogger Bank) depends on a combination of external and internal regulatory factors, including fishing and climate effects, as well as density dependence and food availability of the preferred zooplankton prey (Calanus finmarchicus and Temora longicornis). Furthermore, our model scenarios suggest that while fishing largely contributed to the abrupt stock decline during the late 1990s and the following period of low biomass, a complete recovery of the stock to the highly productive levels of the early 1980s would only be possible through changes in the surrounding ecosystem, involving lower temperatures and improved feeding conditions. To that end, we stress the need for ecosystem‐based management accounting for multiple internal and external factors occurring within the broader context of the ecosystem in which forage fish species, such as sandeel, play an important and integral part.     

Spins in the vortices of a high-temperature superconductor

Neutron scattering is used to characterize the magnetism of the vortices for the optimally doped high-temperature superconductor La(2-x)Sr(x)CuO4 (x = 0.163) in an applied magnetic field. As temperature is reduced, low-frequency spin fluctuations first disappear with the loss of vortex mobility, but then reappear. We find that the vortex state can be regarded as an inhomogeneous mixture of a superconducting spin fluid and a material containing a nearly ordered antiferromagnet. These experiments show that as for many other properties of cuprate superconductors, the important underlying microscopic forces are magnetic.     

A new greenland deep ice core

The polar ice sheets are rich sources of information on past atmospheric conditions, including paleoclimates. A new deep ice core has been drilled in south Greenland. Comparison of the oxygen isotopic profile with that from camp Century and with a deep-sea foraminifera record indicates that the new core reaches back to about 90,000 years before present in a continuous sequence. The details in the Wisconsin part of the ice core records seem to be climatically, significant, and the general trends reveal all of the relevant Emiliani stages recorded in deep-sea cores. The redated Camp Century record suggests a dramatic termination of the Eem/Sangamon interglacial.